OLFM3

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, OLFM3 RNA differs between tumor and matched normal tissue in 11 of 18 cancer types tested, making tumor–normal expression one of OLFM3’s most consistent transcriptional readouts.

The strongest signal is observed in kidney renal clear cell carcinoma (KIRC), where OLFM3 RNA is repressed in tumor relative to normal tissue. In most cancer types OLFM3 is over-expressed in tumor, although a few such as KIRC and KIRP show the opposite, repressed pattern.

KIRC, KIRP, and COAD are the cancer types where OLFM3 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in OLFM3 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KIRCFemaleIII,IV−0.807<.00112view →
KIRPAllII,III,IV−0.825<.00111view →
COADMaleII,III,IV−0.560<.00111view →
THCAMaleII,III,IV−0.525<.0019view →
KICHAllAll−0.755<.0018view →
STADAllAll−0.315<.0018view →
READAllAll−0.821<.0015view →
UCECAllIV−0.500.0372view →
LUSCAllAll+0.285.0261view →
LIHCAllAll+0.087.0401view →
HNSCAllII,III,IV−0.010.0301view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 11 strongest of 11 lineages.

OLFM3–KIRC

Tumor-vs-normal expression box plot for OLFM3 RNA in KIRC.

Open the KIRC breakdown →

Exploration