OBSL1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, OBSL1 mutation is significantly associated with the RNA expression of many other genes, with 5,615 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible OBSL1-associated genes across cancer lineages are TAF13, COPS3, and HPF1. Each is linked with OBSL1 in more than 4 cancer types. Because this analysis shows association rather than direction, both OBSL1-to-partner and partner-to-OBSL1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TAF13 grouped by OBSL1-low versus OBSL1-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (OBSL1→partner) and Y-score (partner→OBSL1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADTAF13 →+0.570+3.771.001<.00135
COADCOPS3 →+0.555+3.710<.001<.00135
COADHPF1 →+0.512+3.026.001<.00135
UCECMCM10 →+0.592+2.091<.001<.00135
UCECGNPNAT1 →+0.543+1.669<.001<.00135
UCECMRPL19 →+0.433+2.080<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,615 associations by consensus.

TAF13 by OBSL1 expression — COAD

Box plot of TAF13 in OBSL1-low vs OBSL1-high samples in COAD.

Explore this box plot interactively →

Exploration