NYAP2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NYAP2 mutation is significantly associated with the RNA expression of many other genes, with 5,210 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible NYAP2-associated genes across cancer lineages are ATP5MC1, IFRD1, and COX5BP8. Each is linked with NYAP2 in more than 3 cancer types. Because this analysis shows association rather than direction, both NYAP2-to-partner and partner-to-NYAP2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ATP5MC1 grouped by NYAP2-low versus NYAP2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NYAP2→partner) and Y-score (partner→NYAP2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECATP5MC1 →+0.316+1.988.001<.00134
UCECIFRD1 →+0.481+2.148<.001<.00134
READCOX5BP8 →+0.136+3.140<.001.00834
UCECEMID1 →-0.896-1.705<.001.00334
SKCMDPH5 →+0.385+2.025<.001<.00134
UCECC12orf65 →+0.228+1.130.003.00634
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,210 associations by consensus.

ATP5MC1 by NYAP2 expression — UCEC

Box plot of ATP5MC1 in NYAP2-low vs NYAP2-high samples in UCEC.

Explore this box plot interactively →

Exploration