NXF3

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, NXF3 RNA expression is significantly associated with the go_rna of many other GO terms, with 2,914 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible NXF3-associated GO terms across cancer lineages are Response to oxygen levels, Positive regulation of protein transport, and Regulation of protein localization to membrane. Each is linked with NXF3 in more than 6 cancer types. Because this analysis shows association rather than direction, both NXF3-to-partner and partner-to-NXF3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Response to oxygen levels grouped by NXF3-low versus NXF3-high in OVARY.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (NXF3→partner) and Y-score (partner→NXF3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVARYResponse to oxygen levels →+0.036+0.200.004.00737
SOFT_TISSUEPositive regulation of protein transport →+0.032+0.321.009.00336
PANCREASRegulation of protein localization to membrane →+0.071+0.692<.001.00627
SOFT_TISSUEMulti-pass transmembrane protein insertion into ER membrane →+0.098+0.369.001.00336
BLOOD_LymphomaPositive regulation of viral life cycle →+0.086+0.383<.001<.00135
BREASTRegulation of muscle cell apoptotic process →+0.053+0.172<.001.00235
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,914 associations by consensus.

Response to oxygen levels by NXF3 expression — OVARY

Box plot of Response to oxygen levels in NXF3-low vs NXF3-high samples in OVARY.

Explore this box plot interactively →

Exploration