NUP93

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, NUP93 mutation is significantly associated with the RNA expression of many other genes, with 31 significant associations in total. OVARY shows the largest number of these associations.

The most reproducible NUP93-associated genes across cancer lineages are KRTAP10-6, ACTBL2, and KLK15. Each is linked with NUP93 in more than 1 cancer types. Because this analysis shows association rather than direction, both NUP93-to-partner and partner-to-NUP93 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, KRTAP10-6 grouped by NUP93-low versus NUP93-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NUP93→partner) and Y-score (partner→NUP93) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEKRTAP10-6 →+0.038+3.347<.001.00532
BLOOD_LeukemiaACTBL2 →+0.020+3.502<.001.00531
BLOOD_LeukemiaKLK15 →+0.398+3.354<.001.00131
BLOOD_LeukemiaOR10K2 →+0.032+3.121<.001.00331
BLOOD_LeukemiaOR10R2 →+1.180+2.966<.001.00531
BLOOD_LeukemiaTCEAL6 →+0.027+3.718<.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 31 associations by consensus.

KRTAP10-6 by NUP93 expression — LARGE_INTESTINE

Box plot of KRTAP10-6 in NUP93-low vs NUP93-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration