NUGGC

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NUGGC mutation is significantly associated with the RNA expression of many other genes, with 3,590 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible NUGGC-associated genes across cancer lineages are CDCA2, ASIC3, and FANCC. Each is linked with NUGGC in more than 2 cancer types. Because this analysis shows association rather than direction, both NUGGC-to-partner and partner-to-NUGGC results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NUGGC→partner) and Y-score (partner→NUGGC) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCDCA2 →+0.711+1.906<.001<.00133
COADASIC3 →+0.637+3.200<.001.00933
UCECFANCC →+0.390+2.491<.001<.00133
UCECCHAF1B →+0.512+2.408<.001<.00133
UCECNUDT2 →+0.449+2.202<.001.00133
UCECZNF367 →+0.650+2.146<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,590 associations by consensus.

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