NSF

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NSF RNA expression is significantly associated with the protein abundance of many other proteins, with 20,021 significant associations in total. GBM shows the largest number of these associations.

The most reproducible NSF-associated proteins across cancer lineages are RRAS, PSME3, and SPAST. Each is linked with NSF in more than 5 cancer types. Because this analysis shows association rather than direction, both NSF-to-partner and partner-to-NSF results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, NSF versus RRAS in GBM, with a Pearson correlation of -0.34.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (NSF→partner) and Y-score (partner→NSF) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMRRAS →-0.505-0.376<.001.00236
LSCCPSME3 →+0.391+0.459<.001<.00136
LSCCSPAST →+0.437+0.471<.001<.00135
LUADCCDC43 →+0.359+0.467<.001<.00135
GBMTNFAIP8 →-0.682-0.361<.001<.00135
GBMNECAP2 →-0.289-0.403<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 20,021 associations by consensus.

NSF vs RRAS — GBM

Per-sample scatter of NSF vs RRAS in GBM (Pearson r = -0.34).

Explore this scatter interactively →

Exploration