NRP2

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, NRP2 mutation is significantly associated with the RNA expression of many other genes, with 109 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible NRP2-associated genes across cancer lineages are OR4F21, DMRTC2, and HABP2. Each is linked with NRP2 in more than 1 cancer types. Because this analysis shows association rather than direction, both NRP2-to-partner and partner-to-NRP2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR4F21 grouped by NRP2-low versus NRP2-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NRP2→partner) and Y-score (partner→NRP2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEOR4F21 →+0.119+2.041<.001.00732
BLOOD_LeukemiaDMRTC2 →+0.036+4.539<.001.00732
SKINHABP2 →+0.158+3.451<.001.00832
SOFT_TISSUEOR2M5 →+0.017+4.369<.001.00831
SOFT_TISSUESLCO1B7 →+0.221+4.417<.001.00431
SOFT_TISSUETCP11X2 →+0.010+4.977<.001.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 109 associations by consensus.

OR4F21 by NRP2 expression — LARGE_INTESTINE

Box plot of OR4F21 in NRP2-low vs NRP2-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration