NRM

mutation — cross-omics
Cross-omicsMUTATION → IMMUNEPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NRM mutation is significantly associated with the immune_cell of many other genes, with 4 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible NRM-associated genes across cancer lineages are Monocytes, Basophils, and Myocytes. Each is linked with NRM in more than 1 cancer types. Because this analysis shows association rather than direction, both NRM-to-partner and partner-to-NRM results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Monocytes grouped by NRM-low versus NRM-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NRM→partner) and Y-score (partner→NRM) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMMonocytes →+0.014+5.225<.001.03431
UCECBasophils →+0.193+3.169.038.02031
UCECMyocytes →+0.045+3.212.012.01012
UCECpDC →+0.057+2.815.032.03621
Each partner links to its Q-omics profile. Showing the 4 strongest of 4 associations by consensus.

Monocytes by NRM expression — SKCM

Box plot of Monocytes in NRM-low vs NRM-high samples in SKCM.

Explore this box plot interactively →

Exploration