NPLOC4

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NPLOC4 mutation is significantly associated with the total protein of many other genes, with 37 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible NPLOC4-associated genes across cancer lineages are ERK2, mTOR_pS2448, and Akt_pT308. Each is linked with NPLOC4 in more than 1 cancer types. Because this analysis shows association rather than direction, both NPLOC4-to-partner and partner-to-NPLOC4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ERK2 grouped by NPLOC4-low versus NPLOC4-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NPLOC4→partner) and Y-score (partner→NPLOC4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECERK2 →+0.215+2.700.002.00532
UCECmTOR_pS2448 →-0.128-2.095.019.01732
UCECAkt_pT308 →+0.478+2.000.038.02932
UCECPDCD4 →-0.506-1.502.003.03032
UCECC-Raf →+0.129+2.000.014.03032
UCECEGFR_pY1068 →-0.280-1.847.002.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 37 associations by consensus.

ERK2 by NPLOC4 expression — UCEC

Box plot of ERK2 in NPLOC4-low vs NPLOC4-high samples in UCEC.

Explore this box plot interactively →

Exploration