NPDC1

mass-spec protein & survival
Survivalmass-specKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, NPDC1 mass-spec protein is linked to patient survival in 6 of 34 cancer types, making it a survival-associated NPDC1 data layer compared with 24 for mass-spec protein and 2 for mutation status.

The strongest signal is observed in pancreatic ductal adenocarcinoma (PDAC), where higher NPDC1 mass-spec protein is associated with better disease-free survival. In most high-consensus cancer types, elevated NPDC1 expression acts as an unfavorable survival marker, although some lineages such as PDAC and UCEC show a favorable association.

PDAC, HNSC, and UCEC are the cancer types where NPDC1 mass-spec protein most reproducibly stratifies survival.

mass-spec protein survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
PDACDFSTertileAll0.5930.276.00329view →
HNSCOSTertileIII,IV0.5090.757.01715view →
UCECDFSMedianAll0.9520.853.0206view →
GBMOSMedianAll0.2840.464.0076view →
LUADDFSMedianAll0.7560.422.0116view →
LSCCDFSMedianIII,IV0.5901.000.0491view →
Pink = unfavorable, green = favorable. Showing the 6 strongest of 6 lineages.

NPDC1–PDAC (DFS)

Kaplan–Meier survival curve for NPDC1 mass-spec protein-high vs -low samples in PDAC.

Open the PDAC breakdown →

Exploration