NOX4

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NOX4 mutation is significantly associated with the RNA expression of many other genes, with 2,500 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible NOX4-associated genes across cancer lineages are NDC80, EME1, and RPL35AP3. Each is linked with NOX4 in more than 3 cancer types. Because this analysis shows association rather than direction, both NOX4-to-partner and partner-to-NOX4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, NDC80 grouped by NOX4-low versus NOX4-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NOX4→partner) and Y-score (partner→NOX4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECNDC80 →+0.568+2.284.008<.00134
UCECEME1 →+0.638+3.126<.001<.00133
UCECRPL35AP3 →+0.167+2.168.002<.00133
UCECSKA1 →+0.777+3.346<.001<.00124
UCECRCCD1 →+0.431+2.304<.001<.00133
UCECSNRPD1 →+0.430+1.871.001.00433
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,500 associations by consensus.

NDC80 by NOX4 expression — UCEC

Box plot of NDC80 in NOX4-low vs NOX4-high samples in UCEC.

Explore this box plot interactively →

Exploration