NOP58

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NOP58 mutation is significantly associated with the total protein of many other genes, with 27 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible NOP58-associated genes across cancer lineages are ASNS, EGFR_pY1068, and eIF4E. Each is linked with NOP58 in more than 1 cancer types. Because this analysis shows association rather than direction, both NOP58-to-partner and partner-to-NOP58 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ASNS grouped by NOP58-low versus NOP58-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NOP58→partner) and Y-score (partner→NOP58) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECASNS →+0.431+2.584.001.01032
UCECEGFR_pY1068 →-0.239-3.459.011.00531
UCECeIF4E →+0.194+2.662.014<.00131
UCECeIF4G →+0.273+2.321.018.03331
UCECFASN →+0.461+2.222.001.01031
UCECFoxM1 →+0.252+2.469.009.01031
Each partner links to its Q-omics profile. Showing the 6 strongest of 27 associations by consensus.

ASNS by NOP58 expression — UCEC

Box plot of ASNS in NOP58-low vs NOP58-high samples in UCEC.

Explore this box plot interactively →

Exploration