NMI

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NMI protein abundance is significantly associated with the RNA expression of many other genes, with 16,110 significant associations in total. GBM shows the largest number of these associations.

The most reproducible NMI-associated genes across cancer lineages are ETV7, OAS2, and IFIH1. Each is linked with NMI in more than 9 cancer types. Because this analysis shows association rather than direction, both NMI-to-partner and partner-to-NMI results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, NMI versus ETV7 in BRCA, with a Pearson correlation of 0.67.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NMI→partner) and Y-score (partner→NMI) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAETV7 →+1.380+0.549<.001<.001310
LSCCOAS2 →+1.489+0.554<.001<.001310
BRCAIFIH1 →+1.072+0.516<.001<.001310
OVCD2 →+1.971+0.646<.001<.001310
BRCACD80 →+0.950+0.530<.001<.001310
HNSCZBP1 →+1.329+0.649<.001<.001310
Each partner links to its Q-omics profile. Showing the 6 strongest of 16,110 associations by consensus.

NMI vs ETV7 — BRCA

Per-sample scatter of NMI vs ETV7 in BRCA (Pearson r = 0.67).

Explore this scatter interactively →

Exploration