NME4

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NME4 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,788 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible NME4-associated proteins across cancer lineages are PLCL2_S1113, ABI3, and GGA3_S159. Each is linked with NME4 in more than 5 cancer types. Because this analysis shows association rather than direction, both NME4-to-partner and partner-to-NME4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, NME4 versus PLCL2_S1113 in LSCC, with a Pearson correlation of -0.41.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (NME4→partner) and Y-score (partner→NME4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCPLCL2_S1113 →-0.514-0.469<.001<.00136
GBMABI3 →-0.464-0.323<.001<.00135
LSCCGGA3_S159 →-0.288-0.456<.001.00235
UCECMYO18A →-0.273-0.664<.001<.00135
HNSCIL16 →-0.632-0.534<.001.00135
HNSCP4HA1 →+0.580+0.680<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,788 associations by consensus.

NME4 vs PLCL2_S1113 — LSCC

Per-sample scatter of NME4 vs PLCL2_S1113 in LSCC (Pearson r = -0.41).

Explore this scatter interactively →

Exploration