NMD3P2

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NMD3P2 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,403 significant associations in total. STAD shows the largest number of these associations.

The most reproducible NMD3P2-associated GO terms across cancer lineages are Regulation of signal transduction by p53 class mediator, mRNA 3'-end processing, and Chromosome localization. Each is linked with NMD3P2 in more than 10 cancer types. Because this analysis shows association rather than direction, both NMD3P2-to-partner and partner-to-NMD3P2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of signal transduction by p53 class mediator grouped by NMD3P2-low versus NMD3P2-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (NMD3P2→partner) and Y-score (partner→NMD3P2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADRegulation of signal transduction by p53 class mediator →+0.063+0.134<.001<.001311
STADmRNA 3'-end processing →+0.066+0.152<.001<.001311
STADChromosome localization →+0.068+0.135<.001<.001310
UCECRegulation of mRNA catabolic process →+0.053+0.039<.001<.001310
STADNucleotide-excision repair →+0.055+0.148<.001<.001310
UCECRegulatory ncRNA processing →+0.045+0.043<.001<.001310
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,403 associations by consensus.

Regulation of signal transduction by p53 class mediator by NMD3P2 expression — STAD

Box plot of Regulation of signal transduction by p53 class mediator in NMD3P2-low vs NMD3P2-high samples in STAD.

Explore this box plot interactively →

Exploration