NLRC3

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NLRC3 protein abundance is significantly associated with the RNA expression of many other genes, with 5,267 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible NLRC3-associated genes across cancer lineages are MEFV, TMEM176B, and ADGRG3. Each is linked with NLRC3 in more than 2 cancer types. Because this analysis shows association rather than direction, both NLRC3-to-partner and partner-to-NLRC3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, NLRC3 versus MEFV in HNSC, with a Pearson correlation of 0.51.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NLRC3→partner) and Y-score (partner→NLRC3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCMEFV →+1.010+1.938.005.00533
HNSCTMEM176B →+1.764+2.355.002<.00133
HNSCADGRG3 →+1.510+1.582.002.00933
HNSCSLC17A9 →+1.233+2.281.006.00223
LUADPPP1R16B →+0.831+0.497.001.00432
LSCCTNFSF13B →+0.941+0.596<.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,267 associations by consensus.

NLRC3 vs MEFV — HNSC

Per-sample scatter of NLRC3 vs MEFV in HNSC (Pearson r = 0.51).

Explore this scatter interactively →

Exploration