NKTR

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NKTR protein abundance is significantly associated with the RNA expression of many other genes, with 12,313 significant associations in total. GBM shows the largest number of these associations.

The most reproducible NKTR-associated genes across cancer lineages are LILRA1, TARS2, and TAF1A. Each is linked with NKTR in more than 4 cancer types. Because this analysis shows association rather than direction, both NKTR-to-partner and partner-to-NKTR results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, NKTR versus LILRA1 in GBM, with a Pearson correlation of -0.38.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NKTR→partner) and Y-score (partner→NKTR) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMLILRA1 →-0.564-0.251.001<.00135
UCECTARS2 →+0.563+0.140<.001.00135
UCECTAF1A →+0.451+0.209.008<.00135
OVANTXR2 →-0.988-0.376<.001<.00135
GBMIGFBP7 →-0.870-0.208<.001.00335
LSCCGPR89B →+0.531+0.205<.001.00235
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,313 associations by consensus.

NKTR vs LILRA1 — GBM

Per-sample scatter of NKTR vs LILRA1 in GBM (Pearson r = -0.38).

Explore this scatter interactively →

Exploration