NKAIN4

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, NKAIN4 mutation is significantly associated with the RNA expression of many other genes, with 4 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible NKAIN4-associated genes across cancer lineages are OTOP3, OR5M11, and NEXMIF. Each is linked with NKAIN4 in more than 1 cancer types. Because this analysis shows association rather than direction, both NKAIN4-to-partner and partner-to-NKAIN4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OTOP3 grouped by NKAIN4-low versus NKAIN4-high in SKIN.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NKAIN4→partner) and Y-score (partner→NKAIN4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINOTOP3 →+0.019+3.930<.001.00331
SKINOR5M11 →+0.057+4.437<.001.00431
SKINNEXMIF →+0.120+4.510<.001.00131
CNSKIR2DL3 →+0.021+4.981<.001.00831
Each partner links to its Q-omics profile. Showing the 4 strongest of 4 associations by consensus.

OTOP3 by NKAIN4 expression — SKIN

Box plot of OTOP3 in NKAIN4-low vs NKAIN4-high samples in SKIN.

Explore this box plot interactively →

Exploration