NIPAL3

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NIPAL3 RNA expression is significantly associated with the protein abundance of many other proteins, with 16,201 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible NIPAL3-associated proteins across cancer lineages are CAD_S1859, CYB5R1, and EIF2S2. Each is linked with NIPAL3 in more than 3 cancer types. Because this analysis shows association rather than direction, both NIPAL3-to-partner and partner-to-NIPAL3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, NIPAL3 versus CAD_S1859 in LUAD, with a Pearson correlation of -0.42.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (NIPAL3→partner) and Y-score (partner→NIPAL3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADCAD_S1859 →-0.453-0.435<.001<.00134
GBMCYB5R1 →+0.381+0.758.003.00534
BRCAEIF2S2 →-0.226-0.540<.001<.00134
UCECGIPC1 →+0.260+0.491.005.00834
LUADHDLBP_S944 →-0.469-0.486<.001<.00134
GBMRASAL1 →+0.819+0.741<.001.00434
Each partner links to its Q-omics profile. Showing the 6 strongest of 16,201 associations by consensus.

NIPAL3 vs CAD_S1859 — LUAD

Per-sample scatter of NIPAL3 vs CAD_S1859 in LUAD (Pearson r = -0.42).

Explore this scatter interactively →

Exploration