NIPA2

Across TCGA cell cohorts, NIPA2 mutation is significantly associated with the RNA expression of many other genes, with 2 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible NIPA2-associated genes across cancer lineages are TMCO5A and LCE1F. Each is linked with NIPA2 in more than 1 cancer types. Because this analysis shows association rather than direction, both NIPA2-to-partner and partner-to-NIPA2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TMCO5A grouped by NIPA2-low versus NIPA2-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NIPA2→partner) and Y-score (partner→NIPA2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LARGE_INTESTINE	TMCO5A →	+0.019	+4.415	<.001	.007	3	1
LARGE_INTESTINE	LCE1F →	+0.122	+4.415	<.001	.007	3	1

Each partner links to its Q-omics profile. Showing the 2 strongest of 2 associations by consensus.

TMCO5A by NIPA2 expression — LARGE_INTESTINE

Explore this box plot interactively →