NID2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NID2 mutation is significantly associated with the RNA expression of many other genes, with 5,244 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible NID2-associated genes across cancer lineages are GUCA1B, OTX1, and EIF2B2. Each is linked with NID2 in more than 3 cancer types. Because this analysis shows association rather than direction, both NID2-to-partner and partner-to-NID2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GUCA1B grouped by NID2-low versus NID2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NID2→partner) and Y-score (partner→NID2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECGUCA1B →+0.365+1.712<.001<.00134
LUADOTX1 →+0.509+2.330.007.00334
UCECEIF2B2 →+0.273+1.758<.001.00134
UCECENOPH1 →+0.394+1.879<.001<.00134
COADTYMS →+0.848+3.087<.001<.00134
UCECCPSF7 →+0.239+2.091.003<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,244 associations by consensus.

GUCA1B by NID2 expression — UCEC

Box plot of GUCA1B in NID2-low vs NID2-high samples in UCEC.

Explore this box plot interactively →

Exploration