NGB

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, NGB RNA expression is significantly associated with the go_rna of many other GO terms, with 627 significant associations in total. LUNG_SCLC shows the largest number of these associations.

The most reproducible NGB-associated GO terms across cancer lineages are Negative regulation of mRNA metabolic process, Cytoplasmic translation, and Negative regulation of syncytium formation by plasma membrane fusion. Each is linked with NGB in more than 6 cancer types. Because this analysis shows association rather than direction, both NGB-to-partner and partner-to-NGB results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Negative regulation of mRNA metabolic process grouped by NGB-low versus NGB-high in LUNG_SCLC.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (NGB→partner) and Y-score (partner→NGB) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCNegative regulation of mRNA metabolic process →+0.061+1.625.001.00537
OVARYCytoplasmic translation →+0.091+0.076<.001.00737
LUNG_SCLCNegative regulation of syncytium formation by plasma membrane fusion →+0.107+1.753<.001.00237
LUNG_SCLCRegulation of myoblast fusion →+0.112+2.038<.001<.00136
LUNG_SCLCRegulation of syncytium formation by plasma membrane fusion →+0.118+2.055<.001<.00136
LUNG_SCLCMitochondrial electron transport, cytochrome c to oxygen →+0.076+1.353<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 627 associations by consensus.

Negative regulation of mRNA metabolic process by NGB expression — LUNG_SCLC

Box plot of Negative regulation of mRNA metabolic process in NGB-low vs NGB-high samples in LUNG_SCLC.

Explore this box plot interactively →

Exploration