NFXL1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NFXL1 mutation is significantly associated with the RNA expression of many other genes, with 1,791 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible NFXL1-associated genes across cancer lineages are TMEM71, MYPOP, and MIR4695. Each is linked with NFXL1 in more than 2 cancer types. Because this analysis shows association rather than direction, both NFXL1-to-partner and partner-to-NFXL1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TMEM71 grouped by NFXL1-low versus NFXL1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NFXL1→partner) and Y-score (partner→NFXL1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECTMEM71 →-0.271-2.967.005.00133
UCECMYPOP →+0.310+2.721.004<.00133
LUADMIR4695 →+0.154+5.930<.001<.00133
UCECPACRG →-1.052-2.321<.001<.00133
UCECTBC1D4 →-0.631-1.989<.001.00133
STADOR11H2 →+0.083+3.156.002.00633
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,791 associations by consensus.

TMEM71 by NFXL1 expression — UCEC

Box plot of TMEM71 in NFXL1-low vs NFXL1-high samples in UCEC.

Explore this box plot interactively →

Exploration