NFS1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NFS1 mutation is significantly associated with the total protein of many other genes, with 9 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible NFS1-associated genes across cancer lineages are MEK1, Notch1, and p62 Lck ligand. Each is linked with NFS1 in more than 1 cancer types. Because this analysis shows association rather than direction, both NFS1-to-partner and partner-to-NFS1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MEK1 grouped by NFS1-low versus NFS1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NFS1→partner) and Y-score (partner→NFS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMEK1 →+0.556+3.584.001.00231
UCECNotch1 →+0.159+2.820.019.03531
UCECp62 Lck ligand →+0.338+2.459.031.02031
UCECVHL →-1.186-2.459<.001.02031
UCECXBP1 →-0.231-2.986<.001.03531
UCEC4E-BP1_pT37_T46 →-0.388-3.156.032.01831
Each partner links to its Q-omics profile. Showing the 6 strongest of 9 associations by consensus.

MEK1 by NFS1 expression — UCEC

Box plot of MEK1 in NFS1-low vs NFS1-high samples in UCEC.

Explore this box plot interactively →

Exploration