NFE2L2

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, NFE2L2 mutation is significantly associated with the RNA expression of many other genes, with 46 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible NFE2L2-associated genes across cancer lineages are TREML4, PRM2, and POU3F1. Each is linked with NFE2L2 in more than 1 cancer types. Because this analysis shows association rather than direction, both NFE2L2-to-partner and partner-to-NFE2L2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TREML4 grouped by NFE2L2-low versus NFE2L2-high in OESOPHAGUS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NFE2L2→partner) and Y-score (partner→NFE2L2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OESOPHAGUSTREML4 →+0.272+4.044<.001<.00132
URINARY_TRACTPRM2 →+0.096+5.087<.001.00432
LUNG_NSCLC_LUSCPOU3F1 →+0.088+3.222.005.00431
OESOPHAGUSBPIFB4 →+0.068+3.137.001.00331
OESOPHAGUSTUBA3C →+0.026+3.569.005.00331
UPPER_AERODIGESTIVE_TRACTMMD2 →+0.036+4.736<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 46 associations by consensus.

TREML4 by NFE2L2 expression — OESOPHAGUS

Box plot of TREML4 in NFE2L2-low vs NFE2L2-high samples in OESOPHAGUS.

Explore this box plot interactively →

Exploration