NFASC

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NFASC protein abundance is significantly associated with the RNA expression of many other genes, with 6,311 significant associations in total. GBM shows the largest number of these associations.

The most reproducible NFASC-associated genes across cancer lineages are SLC1A2, IRAG1-AS1, and NMT2. Each is linked with NFASC in more than 3 cancer types. Because this analysis shows association rather than direction, both NFASC-to-partner and partner-to-NFASC results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, NFASC versus SLC1A2 in GBM, with a Pearson correlation of 0.32.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NFASC→partner) and Y-score (partner→NFASC) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMSLC1A2 →+1.098+0.498<.001<.00134
UCECIRAG1-AS1 →+0.781+0.447<.001<.00134
UCECNMT2 →+0.415+0.384.005.00433
GBMCACNA2D3 →+0.996+0.513<.001<.00133
UCECCES4A →+1.103+0.526<.001<.00133
UCECGPR162 →+0.923+0.469<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,311 associations by consensus.

NFASC vs SLC1A2 — GBM

Per-sample scatter of NFASC vs SLC1A2 in GBM (Pearson r = 0.32).

Explore this scatter interactively →

Exploration