NEUROD2

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NEUROD2 mutation is significantly associated with the total protein of many other genes, with 7 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible NEUROD2-associated genes across cancer lineages are Rad50, ACC1, and TSC1. Each is linked with NEUROD2 in more than 1 cancer types. Because this analysis shows association rather than direction, both NEUROD2-to-partner and partner-to-NEUROD2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Rad50 grouped by NEUROD2-low versus NEUROD2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NEUROD2→partner) and Y-score (partner→NEUROD2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRad50 →-0.368-3.000.008.03732
UCECACC1 →+0.467+3.000.026.03731
UCECTSC1 →-0.212-3.000.032.03722
UCECERK2 →+0.276+3.000.013.03721
UCECSCD →+0.174+3.013.006.01921
UCECSTAT3_pY705 →-0.361-3.000.017.03721
Each partner links to its Q-omics profile. Showing the 6 strongest of 7 associations by consensus.

Rad50 by NEUROD2 expression — UCEC

Box plot of Rad50 in NEUROD2-low vs NEUROD2-high samples in UCEC.

Explore this box plot interactively →

Exploration