NEU1

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, NEU1 mutation is significantly associated with the RNA expression of many other genes, with 78 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible NEU1-associated genes across cancer lineages are ARGFX, SLC5A4, and SLC32A1. Each is linked with NEU1 in more than 1 cancer types. Because this analysis shows association rather than direction, both NEU1-to-partner and partner-to-NEU1 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NEU1→partner) and Y-score (partner→NEU1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEARGFX →+0.008+3.700<.001.00931
BLOOD_LeukemiaSLC5A4 →+0.270+3.471<.001.00431
BLOOD_LeukemiaSLC32A1 →+0.756+3.486<.001<.00131
BLOOD_LeukemiaTNFSF8 →+1.519+3.672.001.00331
BLOOD_LeukemiaPHOX2B →+0.020+3.966<.001<.00131
BLOOD_LeukemiaELOVL4 →+3.198+3.392<.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 78 associations by consensus.

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