NEPRO

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NEPRO mutation is significantly associated with the total protein of many other genes, with 33 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible NEPRO-associated genes across cancer lineages are eEF2, eIF4E, and JNK2. Each is linked with NEPRO in more than 2 cancer types. Because this analysis shows association rather than direction, both NEPRO-to-partner and partner-to-NEPRO results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, eEF2 grouped by NEPRO-low versus NEPRO-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NEPRO→partner) and Y-score (partner→NEPRO) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECeEF2 →+0.417+3.700<.001.00132
UCECeIF4E →+0.182+2.700.014.00623
UCECJNK2 →+0.156+1.662.026.01132
UCECShc_pY317 →-0.108-1.362.043.03732
UCECSTAT3_pY705 →-0.288-1.362.001.03732
UCECTFRC →+0.380+1.362.043.03732
Each partner links to its Q-omics profile. Showing the 6 strongest of 33 associations by consensus.

eEF2 by NEPRO expression — UCEC

Box plot of eEF2 in NEPRO-low vs NEPRO-high samples in UCEC.

Explore this box plot interactively →

Exploration