NELFCD

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NELFCD protein abundance is significantly associated with the RNA expression of many other genes, with 17,604 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible NELFCD-associated genes across cancer lineages are FCGR2A, HCN3, and VNN2. Each is linked with NELFCD in more than 6 cancer types. Because this analysis shows association rather than direction, both NELFCD-to-partner and partner-to-NELFCD results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, NELFCD versus FCGR2A in COAD, with a Pearson correlation of -0.42.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NELFCD→partner) and Y-score (partner→NELFCD) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADFCGR2A →-0.986-0.249<.001<.00137
HNSCHCN3 →+0.633+0.231<.001.00237
LSCCVNN2 →-1.218-0.306<.001<.00136
HNSCCSF3R →-1.274-0.443<.001<.00136
HNSCTREM1 →-1.351-0.396<.001<.00136
PDACADGRE3 →-0.700-0.292.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 17,604 associations by consensus.

NELFCD vs FCGR2A — COAD

Per-sample scatter of NELFCD vs FCGR2A in COAD (Pearson r = -0.42).

Explore this scatter interactively →

Exploration