NEIL2

Across TCGA cell cohorts, NEIL2 RNA expression is significantly associated with the RNA expression of many other genes, with 10,217 significant associations in total. UPPER_AERODIGESTIVE_TRACT shows the largest number of these associations.

The most reproducible NEIL2-associated genes across cancer lineages are AGPAT5, MCPH1, and POLR3D. Each is linked with NEIL2 in more than 12 cancer types. Because this analysis shows association rather than direction, both NEIL2-to-partner and partner-to-NEIL2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, NEIL2 versus AGPAT5 in BREAST, with a Pearson correlation of 0.62.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NEIL2→partner) and Y-score (partner→NEIL2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BREAST	AGPAT5 →	+1.257	+1.473	<.001	<.001	3	13
BONE	MCPH1 →	+1.044	+0.903	<.001	<.001	3	12
BREAST	POLR3D →	+1.013	+0.953	.001	.007	1	13
UPPER_AERODIGESTIVE_TRACT	MTMR9 →	+0.925	+1.300	<.001	<.001	3	11
UPPER_AERODIGESTIVE_TRACT	RPUSD3 →	+0.973	+0.716	<.001	<.001	3	10
BONE	TNKS →	+1.318	+1.158	<.001	<.001	2	11

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,217 associations by consensus.

NEIL2 vs AGPAT5 — BREAST

Explore this scatter interactively →