NEDD1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NEDD1 mutation is significantly associated with the total protein of many other genes, with 28 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible NEDD1-associated genes across cancer lineages are Shc_pY317, ATM, and Caspase-8. Each is linked with NEDD1 in more than 1 cancer types. Because this analysis shows association rather than direction, both NEDD1-to-partner and partner-to-NEDD1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Shc_pY317 grouped by NEDD1-low versus NEDD1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NEDD1→partner) and Y-score (partner→NEDD1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECShc_pY317 →-0.151-1.906.004.01532
UCECATM →-0.441-1.807.005.02532
UCECCaspase-8 →-0.268-4.143.002<.00132
UCEC4E-BP1 →+0.250+2.029.007.01732
UCECEGFR_pY1068 →-0.228-2.070.008.00131
UCECeIF4E →+0.159+2.598.029.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 28 associations by consensus.

Shc_pY317 by NEDD1 expression — UCEC

Box plot of Shc_pY317 in NEDD1-low vs NEDD1-high samples in UCEC.

Explore this box plot interactively →

Exploration