NDE1

Across TCGA cell cohorts, NDE1 RNA expression is significantly associated with the RNA expression of many other genes, with 10,903 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible NDE1-associated genes across cancer lineages are CCNF, KIF22, and CIT. Each is linked with NDE1 in more than 15 cancer types. Because this analysis shows association rather than direction, both NDE1-to-partner and partner-to-NDE1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, NDE1 versus CCNF in BLOOD_Myeloma, with a Pearson correlation of 0.65.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NDE1→partner) and Y-score (partner→NDE1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BLOOD_Myeloma	CCNF →	+1.210	+0.968	<.001	<.001	3	16
KIDNEY	KIF22 →	+0.954	+0.938	<.001	<.001	3	15
KIDNEY	CIT →	+1.238	+0.925	<.001	<.001	3	14
UPPER_AERODIGESTIVE_TRACT	TBC1D10B →	+0.827	+1.035	.002	.003	2	15
BLOOD_Lymphoma	ARL6IP1 →	+1.301	+1.417	.001	<.001	3	14
KIDNEY	PTBP1 →	+1.045	+1.248	<.001	<.001	3	14

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,903 associations by consensus.

NDE1 vs CCNF — BLOOD_Myeloma

Explore this scatter interactively →