NDC1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NDC1 protein abundance is significantly associated with the RNA expression of many other genes, with 17,184 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible NDC1-associated genes across cancer lineages are NCF4, F13A1, and JAML. Each is linked with NDC1 in more than 6 cancer types. Because this analysis shows association rather than direction, both NDC1-to-partner and partner-to-NDC1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, NDC1 versus NCF4 in OV, with a Pearson correlation of -0.46.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NDC1→partner) and Y-score (partner→NDC1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVNCF4 →-1.007-0.368<.001<.00137
GBMF13A1 →-1.536-0.201.002.00337
OVJAML →-1.196-0.353<.001<.00137
LSCCRAD54L →+0.708+0.215<.001<.00137
LSCCPIK3CG →-0.770-0.267<.001<.00136
OVMS4A6A →-1.238-0.311<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 17,184 associations by consensus.

NDC1 vs NCF4 — OV

Per-sample scatter of NDC1 vs NCF4 in OV (Pearson r = -0.46).

Explore this scatter interactively →

Exploration