NCOA4

mutation — cross-omics
Cross-omicsMUTATION → MUTATIONCell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, NCOA4 mutation is significantly associated with the mutation status of many other genes, with 1,483 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible NCOA4-associated genes across cancer lineages are TBC1D2, IKBKE, and ADGRG7. Each is linked with NCOA4 in more than 2 cancer types. Because this analysis shows association rather than direction, both NCOA4-to-partner and partner-to-NCOA4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TBC1D2 grouped by NCOA4-low versus NCOA4-high in BREAST.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NCOA4→partner) and Y-score (partner→NCOA4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BREASTTBC1D2 →+4.857+4.297.009.00913
BLOOD_LeukemiaIKBKE →+4.000+5.050.008.00813
BLOOD_LeukemiaADGRG7 →+4.000+5.050.008.00813
LARGE_INTESTINETCF25 →+3.329+3.799.005.00513
BLOOD_LeukemiaKCTD15 →+4.321+5.285.005.00513
LARGE_INTESTINENUAK2 →+3.007+3.584.008.00813
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,483 associations by consensus.

TBC1D2 by NCOA4 expression — BREAST

Box plot of TBC1D2 in NCOA4-low vs NCOA4-high samples in BREAST.

Explore this box plot interactively →

Exploration