Across TCGA patient cohorts, NCMAP mutation is significantly associated with the RNA expression of many other genes, with 21 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible NCMAP-associated genes across cancer lineages are RNU6-1298P, RBMY3AP, and CPDP1. Each is linked with NCMAP in more than 1 cancer types. Because this analysis shows association rather than direction, both NCMAP-to-partner and partner-to-NCMAP results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NCMAP→partner) and Y-score (partner→NCMAP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	RNU6-1298P →	+0.418	+7.741	<.001	.009	3	1
COAD	RBMY3AP →	+0.049	+7.741	<.001	.009	3	1
COAD	CPDP1 →	+0.178	+7.741	<.001	.009	3	1
SKCM	RNU6-634P →	+0.257	+5.408	<.001	.002	3	1
SKCM	RPS12P15 →	+0.143	+3.661	<.001	.009	3	1
SKCM	RN7SL831P →	+0.120	+5.634	<.001	.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 21 associations by consensus.

Exploration

NCMAP survival (RNA) · tumor vs normal (RNA) · all NCMAP data types