Across TCGA cell cohorts, NCMAP RNA expression is significantly associated with the go_rna of many other GO terms, with 1,835 significant associations in total. LUNG_NSCLC_LUAD shows the largest number of these associations.

The most reproducible NCMAP-associated GO terms across cancer lineages are Cellular response to alcohol, Establishment of apical/basal cell polarity, and Vesicle localization. Each is linked with NCMAP in more than 7 cancer types. Because this analysis shows association rather than direction, both NCMAP-to-partner and partner-to-NCMAP results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (NCMAP→partner) and Y-score (partner→NCMAP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUNG_NSCLC_LUAD	Cellular response to alcohol →	+0.088	+1.063	<.001	.001	3	8
PANCREAS	Establishment of apical/basal cell polarity →	-0.158	-0.549	.001	.003	3	7
BREAST	Vesicle localization →	+0.051	+0.869	<.001	.002	3	7
LUNG_NSCLC_LUAD	Response to indole-3-methanol →	+0.178	+0.891	<.001	<.001	3	6
LUNG_NSCLC_LUAD	Bundle of His cell to Purkinje myocyte communication →	+0.241	+0.912	.007	.001	3	6
LUNG_NSCLC_LUAD	Positive regulation of establishment of T cell polarity →	-0.154	-0.818	<.001	.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 1,835 associations by consensus.

Exploration

NCMAP survival (RNA) · tumor vs normal (RNA) · all NCMAP data types