NCLP2

Across TCGA patient cohorts, NCLP2 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,765 significant associations in total. STAD shows the largest number of these associations.

The most reproducible NCLP2-associated GO terms across cancer lineages are rRNA metabolic process, Telencephalon development, and Protein sumoylation. Each is linked with NCLP2 in more than 10 cancer types. Because this analysis shows association rather than direction, both NCLP2-to-partner and partner-to-NCLP2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, rRNA metabolic process grouped by NCLP2-low versus NCLP2-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (NCLP2→partner) and Y-score (partner→NCLP2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	rRNA metabolic process →	+0.063	+0.027	<.001	.004	3	11
STAD	Telencephalon development →	+0.038	+0.043	<.001	.001	3	11
STAD	Protein sumoylation →	+0.058	+0.036	<.001	.001	3	10
STAD	Protein localization to chromosome →	+0.052	+0.033	<.001	.001	3	10
STAD	Regulation of microtubule cytoskeleton organization →	+0.054	+0.038	<.001	<.001	3	10
STAD	Telomere maintenance →	+0.056	+0.034	<.001	.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,765 associations by consensus.

rRNA metabolic process by NCLP2 expression — STAD

Explore this box plot interactively →