NCF1

Across TCGA patient cohorts, NCF1 RNA expression is significantly associated with the protein abundance of many other proteins, with 22,335 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible NCF1-associated proteins across cancer lineages are PTPN6, PTPN7, and PTPRC. Each is linked with NCF1 in more than 9 cancer types. Because this analysis shows association rather than direction, both NCF1-to-partner and partner-to-NCF1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, NCF1 versus PTPN6 in GBM, with a Pearson correlation of 0.81.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (NCF1→partner) and Y-score (partner→NCF1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	PTPN6 →	+0.770	+0.705	<.001	<.001	3	10
OV	PTPN7 →	+0.688	+1.137	<.001	<.001	3	10
GBM	PTPRC →	+0.858	+0.790	<.001	<.001	3	10
HNSC	PTPRC_S975 →	+0.745	+0.873	<.001	<.001	3	10
GBM	RASAL3 →	+0.488	+0.713	<.001	<.001	3	10
LSCC	RASAL3_S72 →	+0.801	+0.750	<.001	<.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 22,335 associations by consensus.

NCF1 vs PTPN6 — GBM

Explore this scatter interactively →