NCBP3

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NCBP3 mutation is significantly associated with the total protein of many other genes, with 34 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible NCBP3-associated genes across cancer lineages are Notch1, 14-3-3_beta, and eEF2. Each is linked with NCBP3 in more than 1 cancer types. Because this analysis shows association rather than direction, both NCBP3-to-partner and partner-to-NCBP3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Notch1 grouped by NCBP3-low versus NCBP3-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NCBP3→partner) and Y-score (partner→NCBP3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECNotch1 →+0.112+1.375.009.02032
UCEC14-3-3_beta →-0.122-3.060<.001<.00131
UCECeEF2 →+0.225+1.064.040.04831
UCECeIF4E →+0.148+1.700.021.00131
UCECERK2 →+0.201+2.087<.001.00431
UCECFibronectin →-0.324-1.700.001.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 34 associations by consensus.

Notch1 by NCBP3 expression — UCEC

Box plot of Notch1 in NCBP3-low vs NCBP3-high samples in UCEC.

Explore this box plot interactively →

Exploration