NCAPD2

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, NCAPD2 mutation is significantly associated with the RNA expression of many other genes, with 523 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible NCAPD2-associated genes across cancer lineages are AOC3, AOC2, and DSG1. Each is linked with NCAPD2 in more than 1 cancer types. Because this analysis shows association rather than direction, both NCAPD2-to-partner and partner-to-NCAPD2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, AOC3 grouped by NCAPD2-low versus NCAPD2-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NCAPD2→partner) and Y-score (partner→NCAPD2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaAOC3 →+0.665+3.378<.001.00532
BLOOD_LeukemiaAOC2 →+0.695+3.318<.001.00532
BLOOD_LeukemiaDSG1 →+0.086+3.273.004<.00132
BLOOD_LeukemiaCYP1A2 →+0.023+2.955<.001.00732
BLOOD_LeukemiaEML5 →+0.807+3.259.001.00632
SKINSPATA19 →+0.119+3.099<.001.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 523 associations by consensus.

AOC3 by NCAPD2 expression — BLOOD_Leukemia

Box plot of AOC3 in NCAPD2-low vs NCAPD2-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration