NBPF15

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NBPF15 mutation is significantly associated with the RNA expression of many other genes, with 2,005 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible NBPF15-associated genes across cancer lineages are RNU1-17P, RNU6-13P, and RNY4P9. Each is linked with NBPF15 in more than 1 cancer types. Because this analysis shows association rather than direction, both NBPF15-to-partner and partner-to-NBPF15 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU1-17P grouped by NBPF15-low versus NBPF15-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NBPF15→partner) and Y-score (partner→NBPF15) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRNU1-17P →+0.157+2.257.004.00632
LUADRNU6-13P →+0.287+3.453.003.00932
LUADRNY4P9 →+0.291+3.888.007.00432
HNSCMIR4673 →+0.473+5.303<.001.00632
HNSCRNU6-598P →+0.295+5.124<.001.00832
HNSCMIR625 →+0.360+5.578.001.00432
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,005 associations by consensus.

RNU1-17P by NBPF15 expression — UCEC

Box plot of RNU1-17P in NBPF15-low vs NBPF15-high samples in UCEC.

Explore this box plot interactively →

Exploration