NBN

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NBN protein abundance is significantly associated with the RNA expression of many other genes, with 11,462 significant associations in total. GBM shows the largest number of these associations.

The most reproducible NBN-associated genes across cancer lineages are E2F5, NDUFAF6, and MRE11. Each is linked with NBN in more than 7 cancer types. Because this analysis shows association rather than direction, both NBN-to-partner and partner-to-NBN results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, NBN versus E2F5 in OV, with a Pearson correlation of 0.48.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NBN→partner) and Y-score (partner→NBN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVE2F5 →+0.822+0.417<.001<.00138
HNSCNDUFAF6 →+0.578+0.208.005.00237
HNSCMRE11 →+0.604+0.174<.001<.00137
OVNUDCD1 →+0.599+0.342.001<.00136
LUADVIRMA →+0.453+0.238<.001<.00136
LSCCRBIS →+0.494+0.268<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,462 associations by consensus.

NBN vs E2F5 — OV

Per-sample scatter of NBN vs E2F5 in OV (Pearson r = 0.48).

Explore this scatter interactively →

Exploration