NAV2

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, NAV2 mutation is significantly associated with the RNA expression of many other genes, with 1,707 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible NAV2-associated genes across cancer lineages are SUPT20HL1, UBE2S, and LONP1. Each is linked with NAV2 in more than 2 cancer types. Because this analysis shows association rather than direction, both NAV2-to-partner and partner-to-NAV2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SUPT20HL1 grouped by NAV2-low versus NAV2-high in BLOOD_Myeloma.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NAV2→partner) and Y-score (partner→NAV2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_MyelomaSUPT20HL1 →+0.096+4.807<.001.00633
BLOOD_LeukemiaUBE2S →+0.807+3.214.003.00633
LARGE_INTESTINELONP1 →+0.775+1.721<.001.00333
BLOOD_LymphomaEEF2 →+0.531+3.321.009.00633
LARGE_INTESTINESLC25A19 →+0.517+3.252<.001.00233
LARGE_INTESTINEC6orf52 →+0.834+2.628<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,707 associations by consensus.

SUPT20HL1 by NAV2 expression — BLOOD_Myeloma

Box plot of SUPT20HL1 in NAV2-low vs NAV2-high samples in BLOOD_Myeloma.

Explore this box plot interactively →

Exploration