NAPSB

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NAPSB protein abundance is significantly associated with the RNA expression of many other genes, with 9,030 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible NAPSB-associated genes across cancer lineages are UBXN10, PLA2G2C, and SAMD15. Each is linked with NAPSB in more than 7 cancer types. Because this analysis shows association rather than direction, both NAPSB-to-partner and partner-to-NAPSB results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, NAPSB versus UBXN10 in BRCA, with a Pearson correlation of 0.69.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NAPSB→partner) and Y-score (partner→NAPSB) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAUBXN10 →+2.087+0.884<.001<.00138
BRCAPLA2G2C →+0.984+0.828<.001<.00136
BRCASAMD15 →+1.468+0.991<.001<.00135
UCECCAPS →+2.077+1.002<.001<.00135
BRCACEP126 →+1.355+0.832<.001<.00135
CCRCCTSPAN1 →+1.593+0.535.009.00735
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,030 associations by consensus.

NAPSB vs UBXN10 — BRCA

Per-sample scatter of NAPSB vs UBXN10 in BRCA (Pearson r = 0.69).

Explore this scatter interactively →

Exploration