NAGPA

Across TCGA pan-cancer cohorts, NAGPA Mutation is linked to patient survival in 3 of 34 cancer types, making it a survival-associated NAGPA data layer compared with 26 for mass-spec protein and 3 for mass-spec protein.

The strongest signal is observed in head and neck squamous cell carcinoma (HNSC), where higher NAGPA Mutation is associated with worse overall survival. In most high-consensus cancer types, elevated NAGPA expression acts as an unfavorable survival marker.

HNSC, LAML, and PRAD are the cancer types where NAGPA Mutation most reproducibly stratifies survival.

Mutation survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.

Lineage	Measure	Split	Stage	AUC1 high	AUC2 low	p	Sampling consensus
HNSC	OS	Median	II,III,IV	0.021	0.712	<.001	24	view →
LAML	DFS	Median	All	0.140	0.572	.040	6	view →
PRAD	DFS	Median	All	0.617	0.886	.024	6	view →

Pink = unfavorable, green = favorable. Showing the 3 strongest of 3 lineages.

NAGPA–HNSC (OS)

Open the HNSC breakdown →