NAB2

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, NAB2 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,021 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible NAB2-associated GO terms across cancer lineages are Negative regulation of transcription by RNA polymerase III, Positive regulation of TORC2 signaling, and Regulation of smoothened signaling pathway. Each is linked with NAB2 in more than 12 cancer types. Because this analysis shows association rather than direction, both NAB2-to-partner and partner-to-NAB2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Negative regulation of transcription by RNA polymerase III grouped by NAB2-low versus NAB2-high in BONE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (NAB2→partner) and Y-score (partner→NAB2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BONENegative regulation of transcription by RNA polymerase III →+0.178+1.281<.001<.001313
SKINPositive regulation of TORC2 signaling →+0.099+0.875<.001<.001311
LARGE_INTESTINERegulation of smoothened signaling pathway →+0.048+1.290<.001<.001311
BREASTEpigenetic regulation of gene expression →+0.063+1.044<.001.001311
BLOOD_LymphomaFructose 1,6-bisphosphate metabolic process →+0.162+1.604<.001<.001311
BONEPositive regulation of DNA metabolic process →+0.075+0.891<.001<.001311
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,021 associations by consensus.

Negative regulation of transcription by RNA polymerase III by NAB2 expression — BONE

Box plot of Negative regulation of transcription by RNA polymerase III in NAB2-low vs NAB2-high samples in BONE.

Explore this box plot interactively →

Exploration