MYO5C

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MYO5C mutation is significantly associated with the RNA expression of many other genes, with 5,423 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible MYO5C-associated genes across cancer lineages are ATP2A1-AS1, RPPH1-3P, and NMRAL1. Each is linked with MYO5C in more than 3 cancer types. Because this analysis shows association rather than direction, both MYO5C-to-partner and partner-to-MYO5C results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ATP2A1-AS1 grouped by MYO5C-low versus MYO5C-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MYO5C→partner) and Y-score (partner→MYO5C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECATP2A1-AS1 →+0.613+2.470<.001<.00134
GBMRPPH1-3P →+0.202+6.189<.001.00133
UCECNMRAL1 →+0.236+1.876.006<.00133
UCECMPV17L →-0.604-2.263<.001<.00133
UCECDONSON →+0.333+1.696.001<.00133
UCECCHCHD4 →+0.268+1.402.001.00433
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,423 associations by consensus.

ATP2A1-AS1 by MYO5C expression — UCEC

Box plot of ATP2A1-AS1 in MYO5C-low vs MYO5C-high samples in UCEC.

Explore this box plot interactively →

Exploration