MYF5

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MYF5 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,804 significant associations in total. STAD shows the largest number of these associations.

The most reproducible MYF5-associated GO terms across cancer lineages are Cardiac muscle contraction, Positive regulation of cation channel activity, and Muscle cell development. Each is linked with MYF5 in more than 6 cancer types. Because this analysis shows association rather than direction, both MYF5-to-partner and partner-to-MYF5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Cardiac muscle contraction grouped by MYF5-low versus MYF5-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (MYF5→partner) and Y-score (partner→MYF5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADCardiac muscle contraction →+0.049+0.036<.001.00437
UCSPositive regulation of cation channel activity →+0.046+3.823<.001<.00136
UCSMuscle cell development →+0.058+2.438<.001<.00136
STADConnective tissue development →+0.072+0.021<.001.00536
STADObsolete positive regulation of ER-associated ubiquitin-dependent protein catabolic process →+0.100+0.021<.001.00536
TGCTRegulation of animal organ morphogenesis →+0.064+0.556<.001.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,804 associations by consensus.

Cardiac muscle contraction by MYF5 expression — STAD

Box plot of Cardiac muscle contraction in MYF5-low vs MYF5-high samples in STAD.

Explore this box plot interactively →

Exploration